Protein Information

Protein ZmSBP2
ZmSBP2 is a protein in the SBP family.
Information
TF Name:	ZmSBP2
Species:	Maize
TF Family:	SBP
Gene Name(Synonym):	TSH4
Uniprot ID:	B4FXD9
Subgenome:	1

Overview of domains present in v5 transcripts
	PF03110
Zm00001eb316740_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d020941	DAPseq	sequence	fimo	position
Zm00001d020941	DAPseq	sequence	fimo	position
Zm00001d020941	ChIPseq	sequence	fimo	position
Zm00001d020941	PChIPseq	sequence	fimo	position

Zm00001eb316740_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MATGGGSSRSDDVRGLKFGKKIYFEQDGGSGSGAGAVGGRKGKGVATGGARPASAASAAQPPRCQVDGCGVDLSAVKQYY
CRHKVCNMHSKEPRVFVAGIEQRFCQQCSRFHQLHEFDQGKRSCRRRLIGHNERRRKPPPGPLTSRYGRLAASLQEPGRF
RSFLLDFSYPRVPSSVRDAWPGIQHGGDRMLGTVQWHGHQEPPHPHRSAAAGYGNHAAYNCHGGLVAGGAPMLSSAAFEL
PPGGCVAGVAADSSCALSLLSTQPWDTTSHDHRSPAMPAAGAFDGTPVAPSVMASSYAASSAWTGSRDPAADGARNAQRL
DDALHLVHPGSAAVHFSGELELALQGSGGPPHLPRVDHGGSGGGTFNHSTTSAMNWSL

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF03110
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Nucleotide Sequence
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CACCAGACACGCCAAAAGCGTTATT...

GRMZM2G307588_T01 from maize genome v3

Related TFome: pUT1135

Amino Acid Sequence
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MATGGGSSRSDDVRGLKFGKKIYFEQDGGSGSGAGAVGGRKGKGVATGGARPASAASAAQPPRCQVDGCGVDLSAVKQYY
CRHKVCNMHSKEPRVFVAGIEQRFCQQCSRFHQLHEFDQGKRSCRRRLIGHNERRRKPPPGPLTSRYGRLAASLQEPGRF
RSFLLDFSYPRVPSSVRDAWPGIQHGGDRMLGTVQWHGHQEPPHPHRSAAAGYGNHAAYNCHGGLVAGGAPMLSSAAFEL
PPGGCVAGVAADSSCALSLLSTQPWDTTSHDHRSPAMPAAGAFDGTPVAPSVMASSYAASSAWTGSRDPAADGARNAQRL
DDALHLVHPGSAAVHFSGELELALQGSGGPPHLPRVDHGGSGGGTFNHSTTSAMNWSL

Nucleotide Sequence
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CACCAGACACGCCAAAAGCGTTATT...

Zm00001d020941_T001 from maize genome v4

Amino Acid Sequence
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MATGGGSSRSDDVRGLKFGKKIYFEQDGGSGSGAGAVGGRKGKGVATGGARPASAASAAQPPRCQVDGCGVDLSAVKQYY
CRHKVCNMHSKEPRVFVAGIEQRFCQQCSRFHQLHEFDQGKRSCRRRLIGHNERRRKPPPGPLTSRYGRLAASLQEPGRF
RSFLLDFSYPRVPSSVRDAWPGIQHGGDRMLGTVQWHGHQEPPHPHRSAAAGYGNHAAYNCHGGLVAGGAPMLSSAAFEL
PPGGCVAGVAADSSCALSLLSTQPWDTTSHDHRSPAMPAAGAFDGTPVAPSVMASSYAASSAWTGSRDPAADGARNAQRL
DDALHLVHPGSAAVHFSGELELALQGSGGPPHLPRVDHGGSGGGTFNHSTTSAMNWSL

Nucleotide Sequence
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CACTGCCGCCTACCCTCGTTGAAGC...

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Protein ZmSBP2

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmSBP2 is the regulator

Interactions where ZmSBP2 is the target
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Zm00001eb316740_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G307588_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d020941_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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